Sparse Network Inference using the k-Support Norm

نویسندگان

  • Aman Gupta
  • Haohan Wang
  • Rama Kumar Pasumarthi
چکیده

Network inference is an important problem in a variety of domains. In computational biology, gene interaction networks can be learned using the mRNA expression levels of genes. These networks capture how genes influence each other and can be used to identify potential malfunctions. In the context of social network analysis, network inference refers to the problem of inferring underlying network of influence, given time series data of when users performed certain actions (e.g., post, retweet, share). These networks capture the dynamics of influence and information diffusion. In this position paper, we discuss various strategies to learn sparse networks with the help of the k-support norm, which corresponds to the tightest convex relaxation of sparsity combined with an l2 penalty. We also discuss specific applications of these strategies to the domains of computational biology and social network analysis.

برای دانلود رایگان متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Prediction of soil cation exchange capacity using support vector regression optimized by genetic algorithm and adaptive network-based fuzzy inference system

Soil cation exchange capacity (CEC) is a parameter that represents soil fertility. Being difficult to measure, pedotransfer functions (PTFs) can be routinely applied for prediction of CEC by soil physicochemical properties that can be easily measured. This study developed the support vector regression (SVR) combined with genetic algorithm (GA) together with the adaptive network-based fuzzy infe...

متن کامل

Inference of Sparse Networks with Unobserved Variables. Application to Gene Regulatory Networks

Networks are becoming a unifying framework for modeling complex systems and network inference problems are frequently encountered in many fields. Here, I develop and apply a generative approach to network inference (RCweb) for the case when the network is sparse and the latent (not observed) variables affect the observed ones. From all possible factor analysis (FA) decompositions explaining the...

متن کامل

RCweb

Networks are a unifying framework for modeling complex systems and network inference problems are frequently encountered in many fields. Here, I develop and apply a generative approach to network inference (RCweb) for the case when the network is sparse and the latent (not observed) variables affect the observed ones. From all possible factor analysis (FA) decompositions explaining the variance...

متن کامل

Rice Classification and Quality Detection Based on Sparse Coding Technique

Classification of various rice types and determination of its quality is a major issue in the scientific and commercial fields associated with modern agriculture. In recent years, various image processing techniques are used to identify different types of agricultural products. There are also various color and texture-based features in order to achieve the desired results in this area. In this ...

متن کامل

Long-term Streamflow Forecasting by Adaptive Neuro-Fuzzy Inference System Using K-fold Cross-validation: (Case Study: Taleghan Basin, Iran)

Streamflow forecasting has an important role in water resource management (e.g. flood control, drought management, reservoir design, etc.). In this paper, the application of Adaptive Neuro Fuzzy Inference System (ANFIS) is used for long-term streamflow forecasting (monthly, seasonal) and moreover, cross-validation method (K-fold) is investigated to evaluate test-training data in the model.Then,...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

عنوان ژورنال:

دوره   شماره 

صفحات  -

تاریخ انتشار 2016